Transcript: ENSDART00000143815.2 CELF1-202

Description

cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 3 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000041055.9	CELF1-204	2778	534aa	ENSDARP00000041054.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134570.4	CELF1-203	3709	501aa	ENSDARP00000115192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9IBD0-1	-
ENSDART00000139187.4	CELF1-201	827	228aa	ENSDARP00000121897.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143815.2	CELF1-202	779	169aa	ENSDARP00000120872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 779 bps, Translation length: 169 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143815.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.