Transcript: ENSDART00000149487.2 GPM6A-202

Description

glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]

Location

Chromosome 1: 38,665,167-38,756,904 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 51 variant alleles and maps to 22 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004621.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148404.2	GPM6A-204	2901	292aa	ENSDARP00000124776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000130324.5	GPM6A-207	3391	260aa	ENSDARP00000109235.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000128794.5	GPM6A-206	3327	285aa	ENSDARP00000112234.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DI17	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132402.2	GPM6A-203	801	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000134996.3	GPM6A-205	716	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133771.2	GPM6A-201	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149487.2	GPM6A-202	874	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 874 bps,

Version

ENSDART00000149487.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149487.2 GPM6A-202

Summary

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Transcript: ENSDART00000149487.2 GPM6A-202

Summary

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