Transcript: ENSDART00000142788.3 efhc2-202

Description

EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]

Location

About this transcript

This transcript has 15 exons, is associated with 524 variant alleles and maps to 140 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000008737.9	efhc2-201	2433	748aa	ENSDARP00000010992.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5Q4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142788.3	efhc2-202	2458	345aa	ENSDARP00000116506.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 15, Coding exons: 7, Transcript length: 2,458 bps, Translation length: 345 residues

Version

ENSDART00000142788.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.