Transcript: ENSDART00000136689.3 slf2-201

Description

SMC5-SMC6 complex localization factor 2 [Source:ZFIN;Acc:ZDB-GENE-081107-61]

Location

About this transcript

This transcript has 22 exons, is annotated with 23 domains and features, is associated with 734 variant alleles and maps to 229 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136689.3	slf2-201	5531	1129aa	ENSDARP00000118459.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138362.2	slf2-202	585	51aa	ENSDARP00000137741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 22, Coding exons: 19, Transcript length: 5,531 bps, Translation length: 1,129 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1QB81

Version

ENSDART00000136689.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]