Transcript: ENSDART00000025912.9 itgam.1-201

Description

integrin, alpha M (complement component 3 receptor 3 subunit), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110411-175]

Location

About this transcript

This transcript has 31 exons, is annotated with 49 domains and features, is associated with 291 variant alleles and maps to 326 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025912.9	itgam.1-201	5121	1136aa	ENSDARP00000014655.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153699.4	itgam.1-202	3411	1136aa	ENSDARP00000129555.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSJ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 5,121 bps, Translation length: 1,136 residues

Version

ENSDART00000025912.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non-submitted evidence [Definitions]