Transcript: ENSDART00000011453.11 sypb-201

Description

synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]

Location

About this transcript

This transcript has 8 exons, is annotated with 21 domains and features, is associated with 486 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088240.6	sypb-202	1368	297aa	ENSDARP00000082673.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6H6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114173.4	sypb-203	4078	297aa	ENSDARP00000099412.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6H6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000011453.11	sypb-201	1956	261aa	ENSDARP00000025420.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,956 bps, Translation length: 261 residues

Version

ENSDART00000011453.11

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.