Transcript: ENSDART00000147072.3 CTHRC1-201

Description

collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]

Location

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 509 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147072.3	CTHRC1-201	886	233aa	ENSDARP00000117902.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P0H3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181240.1	CTHRC1-204	696	231aa	ENSDARP00000147333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190549.1	CTHRC1-203	654	217aa	ENSDARP00000147131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190202.1	CTHRC1-202	477	158aa	ENSDARP00000147402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 886 bps, Translation length: 233 residues

Version

ENSDART00000147072.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.