Transcript: ENSDART00000136630.3 matr3l1.2-201

Description

matrin 3-like 1.2 [Source:ZFIN;Acc:ZDB-GENE-090505-1]

Location

Chromosome 14: 25,080,611-25,091,080 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 1 variant allele and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000000394.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144168.3	matr3l1.2-202	3991	1155aa	ENSDARP00000117572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q800H6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184244.1	matr3l1.2-203	3468	1155aa	ENSDARP00000151559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q800H6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136630.3	matr3l1.2-201	1261	420aa	ENSDARP00000122692.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,261 bps, Translation length: 420 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000136630.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136630.3 matr3l1.2-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000136630.3 matr3l1.2-201

Summary

About Us

Get help

Our sister sites

Follow us