Transcript: ENSDART00000148681.2 pcbp4-203

Description

poly(rC) binding protein 4 [Source:NCBI gene (formerly Entrezgene);Acc:406391]

Location

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 816 variant alleles and maps to 34 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137945.3	pcbp4-202	4125	464aa	ENSDARP00000118901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N1TXT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000104693.5	pcbp4-201	4086	442aa	ENSDARP00000095464.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZN9	-
ENSDART00000148681.2	pcbp4-203	650	191aa	ENSDARP00000124370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148886.3	pcbp4-204	455	152aa	ENSDARP00000123850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 650 bps, Translation length: 191 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148681.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.