Transcript: ENSDART00000166327.2 musk-205

Description

muscle, skeletal, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6458]

Location

Chromosome 10: 13,090,156-13,178,920 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 34 domains and features, is associated with 1326 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098764.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160265.2	musk-201	1614	351aa	ENSDARP00000139846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8JFU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000164299.2	musk-203	7932	941aa	ENSDARP00000141486.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000163740.2	musk-202	2826	941aa	ENSDARP00000132148.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5J1R9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000166327.2	musk-205	1608	513aa	ENSDARP00000133070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000164568.2	musk-204	951	248aa	ENSDARP00000135948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,608 bps, Translation length: 513 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000166327.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

Transcript: ENSDART00000166327.2 musk-205

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Transcript: ENSDART00000166327.2 musk-205

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