Transcript: ENSDART00000149082.2 PHKB-202

Description

phosphorylase kinase regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:8927]

Location

Chromosome 7: 42,328,578-42,341,691 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 290 variant alleles and maps to 28 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078284.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112543.4	PHKB-203	4439	1087aa	ENSDARP00000103850.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000148643.4	PHKB-204	3255	1084aa	ENSDARP00000124602.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2U7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000149250.3	PHKB-201	917	271aa	ENSDARP00000125070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149082.2	PHKB-202	865	288aa	ENSDARP00000124795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 865 bps, Translation length: 288 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000149082.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149082.2 PHKB-202

Summary

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Transcript: ENSDART00000149082.2 PHKB-202

Summary

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