Transcript: ENSDART00000138562.4 greb1l-203

Description

GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]

Location

About this transcript

This transcript has 34 exons, is annotated with 23 domains and features, is associated with 3180 variant alleles and maps to 412 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138562.4	greb1l-203	9009	1942aa	ENSDARP00000122959.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9NZP6 B8JKP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000057268.8	greb1l-201	8900	1942aa	ENSDARP00000057267.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9NZP6 B8JKP6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136660.2	greb1l-202	851	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 34, Coding exons: 32, Transcript length: 9,009 bps, Translation length: 1,942 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B8JKP6

Version

ENSDART00000138562.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.