Transcript: ENSDART00000133721.3 troap-201

Description

trophinin associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-1968]

Location

Chromosome 23: 27,575,539-27,589,829 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 11 domains and features, is associated with 319 variant alleles and maps to 249 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094977.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133721.3	troap-201	2994	719aa	ENSDARP00000114107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178404.2	troap-203	2160	719aa	ENSDARP00000143303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC53	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138381.2	troap-202	700	205aa	ENSDARP00000122516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

ID History

Stable ID

ENSDARP00000114107.1

Status

Current

Latest Version

ENSDARP00000114107.1

Release: 114 (current)

Assembly: GRCz11

Database: danio_rerio_core_114_11

Associated archived IDs for this stable ID version

Release	Gene	Transcript	Protein
79	ENSDARG00000094977	ENSDART00000133721.1	ENSDARP00000114107 MSSSNPLRAQNRSQQDQTGMLKSQDLRTKPSASSTKRGSENLDPSASAEAGKVVSKLKGV SRLPVLAKSLQPALSELSQNPNHNKWEQRPLAGKAQKKKTCTKPVPFNLSQSRTRIQKST DVSQGKPPLMPSARLTTAEKLRDLNAGAKTDTQSHKTTTPGVLRTQANKSPRLQSFNNVH YKNSTDGHGCYNQTDLSSRLDCIHLSQSKHPEHSSHLSKASLSKVDVNSENQAPKDKHCF QTVPSTAQSHVSYKGSSQNLSSAVHNVFSREGLSAVGAQCMMPRLSTCPSGPGASNNLPQ RVLKKTHHGVDATADKAGLFSPDPSALRSILQSDGTRLAEHTGATPRVSTCPTGRGTSIY SAQRVPVKKPQTEVSAAVKAPAGSAVSFSPDPAALRSILLNEGVRAGGATPSRVSVCPTG RGTSIYSAQRVPVKKNKQEVMVTAAVSSQCANRTPVMKWTPQRVTNTKPQSMRKLCTTQK MSSLRDSPGFLGSHDPSPGTLMCQEGEKVVQRLFEEQEQMDDDQTDQNGIASQQLLNSHQ SVEAKSTVTENSDSNLHHTKNEGKKTAQPFIQAAHRGSVIVFSSSQRLVSEHSQDRLKTL AANLQLCEDRPTSHNAAQSNGSQINPSVDMTKQSQSKAAITKSSAVSALRRRQTPLEEMF LDEECATYTSRLLSCPLQPRSGNPVASTLLFQDSTCFLPIGLSSPVRLSPVLSSGSIRA
91	ENSDARG00000094977	ENSDART00000133721.2	ENSDARP00000114107 MSSSNPLRAQNRSQQDQTGMLKSQDLRTKPSASSTKRGSENLDPSASAEAGKVVSKLKGV SRLPVLAKSLQPALSELSQNPNHNKWEQRPLAGKAQKKKTCTKPVPFNLSQSRTRIQKST DVSQGKPPLMPSARLTTAEKLRDLNAGAKTDTQSHKTTTPGVLRTQANKSPRLQSFNNVH YKNSTDGHGCYNQTDLSSRLDCIHLSQSKHPEHSSHLSKASLSKVDVNSENQAPKDKHCF QTVPSTAQSHVSYKGSSQNLSSAVHNVFSREGLSAVGAQCMMPRLSTCPSGPGASNNLPQ RVLKKTHHGVDATADKAGLFSPDPSALRSILQSDGTRLAEHTGATPRVSTCPTGRGTSIY SAQRVPVKKPQTEVSAAVKAPAGSAVSFSPDPAALRSILLNEGVRAGGATPSRVSVCPTG RGTSIYSAQRVPVKKNKQEVMVTAAVSSQCANRTPVMKWTPQRVTNTKPQSMRKLCTTQK MSSLRDSPGFLGSHDPSPGTLMCQEGEKVVQRLFEEQEQMDDDQTDQNGIASQQLLNSHQ SVEAKSTVTENSDSNLHHTKNEGKKTAQPFIQAAHRGSVIVFSSSQRLVSEHSQDRLKTL AANLQLCEDRPTSHNAAQSNGSQINPSVDMTKQSQSKAAITKSSAVSALRRRQTPLEEMF LDEECATYTSRLLSCPLQPRSGNPVASTLLFQDSTCFLPIGLSSPVRLSPVLSSGSIRA

Transcript: ENSDART00000133721.3 troap-201

ID History

Associated archived IDs for this stable ID version

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Transcript: ENSDART00000133721.3 troap-201

ID History

Associated archived IDs for this stable ID version

About Us

Get help

Our sister sites

Follow us