Transcript: ENSDART00000104187.6 si:ch211-182e10.4-202

Description

si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]

Location

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 106 variant alleles and maps to 453 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080850.5	si:ch211-182e10.4-201	2380	532aa	ENSDARP00000075296.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000104187.6	si:ch211-182e10.4-202	2365	521aa	ENSDARP00000094962.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IGB0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

ID History

Stable ID

ENSDARP00000094962.4

Status

Current

Latest Version

Release: 114 (current)

Assembly: GRCz11

Database: danio_rerio_core_114_11

Release	Gene	Transcript	Protein
89	ENSDARG00000070661	ENSDART00000104187.4	ENSDARP00000094962 MASQEIMILRVILTEADIRKVTLTSKPCSVEDLINCLRNTLGLNYNFTLQFRDPFFDHEF CNVTALEELPEKPTVKIIPVLELVSVAEDEMQSSSEISSNAPSTADTVLISESPQKKKMP WPDIFLIPKFSVDVEFRLRQANLIYLKDGTHLKMTKELKHDILQKLAETIYSFKAYPSAD DLKGVAKALVNTHPCLQEPGSPSGHCGWTNSLKDKMGNYRSKMRSLGHTDVTVNAGKRGR YSTSSDPPNKNIKKPRKGEVNYLPNLPSGHDTSSLELLRQQLADETKKKKPDATFINQNM DVTLSLRRQEVVINKPPVSQILQRWPALFTESQVYQEFNRIVGKNLKQEFYGSLDHHCPQ LIQIFRSKRGLTGQILSSLLLDAKASDLSDMRCVVVRGLPVLLGDDPSEFFKSCFASDDG DSYQHVPVGILNRENEDALQPLSFRLHPSSVGIILEGNVVMDNIDNIPQAMCLLFGLTYA LHLDYPKCMGNTLLFIQQVLLGLGKKELKGKILAVKNQLAM
91	ENSDARG00000070661	ENSDART00000104187.5	ENSDARP00000094962 MASQEIMILRVILTEADIRKVTLTSKPCSVEDLINCLRNTLGLNYNFTLQFRDPFFDHEF CNVTALEELPEKPTVKIIPVLELVSVAEDEMQSSSEISSNAPSTADTVLISESPQKKKMP WPDIFLIPKFSVDVEFRLRQANLIYLKDGTHLKMTKELKHDILQKLAETIYSFKAYPSAD DLKGVAKALVNTHPCLQEPGSPSGHCGWTNSLKDKMGNYRSKMRSLGHTDVTVNAGKRGR YSTSSDPPNKNIKKPRKGEVNYLPNLPSGHDTSSLELLRQQLADETKKKKPDATFINQNM DVTLSLRRQEVVINKPPVSQILQRWPALFTESQVYQEFNRIVGKNLKQEFYGSLDHHCPQ LIQIFRSKRGLTGQILSSLLLDAKASDLSDMRCVVVRGLPVLLGDDPSEFFKSCFASDDG DSYQHVPVGILNRENEDALQPLSFRLHPSSVGIILEGNVVMDNIDNIPQAMCLLFGLTYA LHLDYPKCMGNTLLFIQQVLLGLGKKELKGKILAVKNQLAM