Transcript: ENSDART00000054590.5 SPON2-202

Description

spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]

Location

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 194 variant alleles and maps to 291 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000010148.5	SPON2-201	2118	331aa	ENSDARP00000023050.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000054590.5	SPON2-202	1633	331aa	ENSDARP00000054589.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

ID History

Stable ID

ENSDARP00000054589.3

Status

Current

Latest Version

Release: 114 (current)

Assembly: GRCz11

Database: danio_rerio_core_114_11

Release	Gene	Transcript	Protein
79	ENSDARG00000002732	ENSDART00000054590.3	ENSDARP00000054589 `METMTSLRVNCWLTMTLALLSGVPAMPVDVDRMCTAPSTAKYRLTFTGQWTQTAFPKHYP LYRPPAQWSPLIGVTHSSDYHLWQRNEYASNGVREFSERAEAWTLIKEVEAAGERIQSVY GLFSAPAVVAGTGHATTEFEVFARHSLLSFIVRIVPSPDWFIGVDSLNLCEGDHWKENIS LELYPYDAGTDSGFTFSSPNFETIPQDKVTQITSSFPSHPANSFYYPRLKHLPPIAKVSL TKIKNNQIFSLPIQPTQSNQIPSGNEIDGPLINTPLDCEVSVWSPWGLCKGQCGEKGVKH RTRYIHMHPANNGAPCPSLEEKRLCIPDNCV`
91	ENSDARG00000002732	ENSDART00000054590.4	ENSDARP00000054589 `METMTSLRVNCWLTMTLALLSGVPAMPVDVDRMCTAPSTAKYRLTFTGQWTQTAFPKHYP LYRPPAQWSPLIGVTHSSDYHLWQRNEYASNGVREFSERAEAWTLIKEVEAAGERIQSVY GLFSAPAVVAGTGHATTEFEVFARHSLLSFIVRIVPSPDWFIGVDSLNLCEGDHWKENIS LELYPYDAGTDSGFTFSSPNFETIPQDKVTQITSSFPSHPANSFYYPRLKHLPPIAKVSL TKIKNNQIFSLPIQPTQSNQIPSGNEIDGPLINTPLDCEVSVWSPWGLCKGQCGEKGVKH RTRYIHMHPANNGAPCPSLEEKRLCIPDNCV`