Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ube2q1 ENSDARG00000100766

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Description

ubiquitin-conjugating enzyme E2Q family member 1 [Source:NCBI gene (formerly Entrezgene);Acc:553603]

Location

Chromosome 18: 50,600,989-50,676,567 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 3 transcripts (splice variants), 224 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159481.3	ube2q1-201	2074	372aa	ENSDARP00000134948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8KBW2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000171207.3	ube2q1-202	1313	377aa	ENSDARP00000141380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYY2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000172264.2	ube2q1-203	717	208aa	ENSDARP00000141148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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