Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ubfd1 ENSDARG00000102827

.

Description

ubiquitin family domain containing 1 [Source:NCBI gene (formerly Entrezgene);Acc:562437]

Location

Chromosome 3: 43,942,032-43,959,873 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 4 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167159.2	ubfd1-203	1237	279aa	ENSDARP00000137446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KNV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000189315.1	ubfd1-204	1446	279aa	ENSDARP00000146521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KNV8	-
ENSDART00000161582.2	ubfd1-202	1046	290aa	ENSDARP00000133491.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157580.2	ubfd1-201	673	153aa	ENSDARP00000140716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

.

Summary

.

.