Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM13 ENSDARG00000010010

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Description

tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]

Location

Chromosome 9: 29,642,857-29,654,998 forward strand.

GRCz11:CM002893.2

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 139 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023210.10	TRIM13-201	2775	414aa	ENSDARP00000013495.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9KUW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175160.2	TRIM13-203	1493	414aa	ENSDARP00000143359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9KUW1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157265.2	TRIM13-202	2077	414aa	ENSDARP00000129064.1	Nonsense mediated decay	H9KUW1	-

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Summary

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