Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HDAC6 ENSDARG00000008384

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Description

histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]

Location

Chromosome 8: 7,393,435-7,444,390 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 180 orthologues, 11 paralogues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148993.3	HDAC6-201	3951	1081aa	ENSDARP00000124246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4B7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180659.1	HDAC6-203	3246	1081aa	ENSDARP00000153983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4B7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149671.2	HDAC6-202	418	33aa	ENSDARP00000124512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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