Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: usp31 ENSDARG00000074017

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Description

ubiquitin specific peptidase 31 [Source:HGNC Symbol;Acc:HGNC:20060]

Location

Chromosome 3: 45,195,219-45,250,924 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181003.1	usp31-202	3912	1303aa	ENSDARP00000156523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QST4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000193586.1	usp31-203	3873	1290aa	ENSDARP00000146973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q2V8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000109017.4	usp31-201	3743	1139aa	ENSDARP00000097526.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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