Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: pcgf5b ENSDARG00000052388

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Description

polycomb group ring finger 5b [Source:NCBI gene (formerly Entrezgene);Acc:692252]

Location

Chromosome 12: 16,405,598-16,435,150 reverse strand.

GRCz11:CM002896.2

About this gene

This gene has 4 transcripts (splice variants), 163 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086211.7	pcgf5b-201	4109	232aa	ENSDARP00000080646.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1JPS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152750.2	pcgf5b-203	714	75aa	ENSDARP00000127000.1	Nonsense mediated decay	-	-
ENSDART00000152819.3	pcgf5b-204	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152271.2	pcgf5b-202	453	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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