Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: arhgef4 ENSDARG00000012914

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Location

Chromosome 2: 16,198,735-16,359,042 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 5 transcripts (splice variants), 180 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057216.8	arhgef4-201	10438	3063aa	ENSDARP00000057215.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000152031.4	arhgef4-203	3431	519aa	ENSDARP00000126484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000133708.4	arhgef4-202	2917	621aa	ENSDARP00000121185.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000165953.2	arhgef4-204	1722	573aa	ENSDARP00000140976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173758.2	arhgef4-205	162	53aa	ENSDARP00000142763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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