Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rps18 ENSDARG00000100392

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Description

ribosomal protein S18 [Source:NCBI gene (formerly Entrezgene);Acc:192300]

Location

Chromosome 19: 18,617,608-18,627,025 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 6 transcripts (splice variants), 336 orthologues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167971.2	rps18-205	683	152aa	ENSDARP00000133054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQW5 Q8JGS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168004.2	rps18-206	786	82aa	ENSDARP00000141432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000162034.2	rps18-202	572	82aa	ENSDARP00000130813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165486.2	rps18-203	464	101aa	ENSDARP00000135459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000160624.2	rps18-201	295	89aa	ENSDARP00000136169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000167704.2	rps18-204	781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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