Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:158464 ENSDARG00000100342

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Description

zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]

Location

Chromosome 18: 50,536,202-50,766,660 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 4 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000168601.3	zgc:158464-202	1286	73aa	ENSDARP00000130774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000170663.3	zgc:158464-203	4094	307aa	ENSDARP00000131933.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000188252.1	zgc:158464-204	654	217aa	ENSDARP00000146782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000158687.3	zgc:158464-201	290	97aa	ENSDARP00000139352.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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