Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: cspg5b ENSDARG00000099793

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Description

chondroitin sulfate proteoglycan 5b [Source:NCBI gene (formerly Entrezgene);Acc:559358]

Location

Chromosome 19: 19,278,082-19,339,337 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 3 transcripts (splice variants), 170 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158413.2	cspg5b-201	1907	481aa	ENSDARP00000136195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4INR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170479.2	cspg5b-203	2485	540aa	ENSDARP00000135714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMK4	-
ENSDART00000164337.2	cspg5b-202	1627	55aa	ENSDARP00000135423.1	Nonsense mediated decay	-	-

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Summary

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