Gene: hmgb1a ENSDARG00000099175

Description

high mobility group box 1a [Source:NCBI gene (formerly Entrezgene);Acc:321622]

Location

GRCz11:CM002894.2

About this gene

This gene has 2 transcripts (splice variants), 452 orthologues, 19 paralogues and is associated with 13 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165386.3	hmgb1a-201	1864	205aa	ENSDARP00000134229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NX86	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193786.1	hmgb1a-202	1267	205aa	ENSDARP00000153427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NX86	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary