Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ctps1b ENSDARG00000098386

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Description

CTP synthase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-160]

Location

Chromosome 16: 35,415,575-35,532,937 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 5 transcripts (splice variants), 200 orthologues, 1 paralogue and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172294.2	ctps1b-204	2008	589aa	ENSDARP00000139667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JT21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193209.1	ctps1b-205	2026	610aa	ENSDARP00000149380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000169689.2	ctps1b-203	821	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000162330.2	ctps1b-201	494	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000162733.2	ctps1b-202	2082	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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