Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: xrn1 ENSDARG00000091652

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Description

5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]

Gene Synonyms

wu:fk92c07, zgc:63635

Location

Chromosome 2: 16,597,011-16,647,259 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 2 transcripts (splice variants), 218 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125413.4	xrn1-201	6418	1697aa	ENSDARP00000105487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4U5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160641.2	xrn1-202	1694	483aa	ENSDARP00000141389.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYZ5	-

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Summary

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