Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rnf4 ENSDARG00000090993

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Description

ring finger protein 4 [Source:ZFIN;Acc:ZDB-GENE-041008-246]

Location

Chromosome 14: 17,566,383-17,576,662 reverse strand.

GRCz11:CM002898.2

About this gene

This gene has 4 transcripts (splice variants), 224 orthologues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168959.2	rnf4-203	1347	184aa	ENSDARP00000138497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193893.1	rnf4-204	3235	184aa	ENSDARP00000157610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUS5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123145.3	rnf4-201	1279	156aa	ENSDARP00000111959.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000161355.2	rnf4-202	796	73aa	ENSDARP00000132556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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