Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP48 ENSDARG00000090301

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Description

ubiquitin specific peptidase 48 [Source:ZFIN;Acc:ZDB-GENE-050522-197]

Location

Chromosome 11: 36,449,698-36,475,124 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues, 41 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123591.3	USP48-203	6559	1092aa	ENSDARP00000111894.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000165203.2	USP48-201	4226	1047aa	ENSDARP00000130019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IB93	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170678.2	USP48-202	1867	515aa	ENSDARP00000131033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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