Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: prodha ENSDARG00000086746

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Description

proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]

Gene Synonyms

fc02a12, im:7136007, si:ch73-209e20.3, wu:fc02a12

Location

Chromosome 21: 5,888,641-5,920,826 forward strand.

GRCz11:CM002905.2

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000091331.7	prodha-201	1890	629aa	ENSDARP00000085764.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FFM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151370.2	prodha-203	981	233aa	ENSDARP00000126280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITK9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151281.2	prodha-202	771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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