Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: pkp3b ENSDARG00000079438

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Description

plakophilin 3 [Source:HGNC Symbol;Acc:HGNC:9025]

Location

Chromosome 7: 32,926,760-32,981,559 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 3 transcripts (splice variants), 190 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113744.5	pkp3b-201	3173	791aa	ENSDARP00000101802.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000175614.2	pkp3b-203	4246	784aa	ENSDARP00000144453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TZC0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000173862.2	pkp3b-202	814	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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