Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cspg4 ENSDARG00000078227

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Description

chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]

Location

Chromosome 25: 6,507,141-6,629,281 reverse strand.

GRCz11:CM002909.2

About this gene

This gene has 2 transcripts (splice variants), 189 orthologues, 2 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112782.4	cspg4-201	7072	2305aa	ENSDARP00000101583.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181740.1	cspg4-202	6819	2272aa	ENSDARP00000144807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PVB6	-

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Summary

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