Gene: PACSIN2 ENSDARG00000078014

Description

protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]

Location

Chromosome 4: 77,933,084-77,955,302 forward strand.

GRCz11:CM002888.2

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues, 5 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148728.3	PACSIN2-203	2327	490aa	ENSDARP00000124182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000159094.2	PACSIN2-205	3120	491aa	ENSDARP00000133109.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IHF0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000149305.3	PACSIN2-201	619	206aa	ENSDARP00000123946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149636.2	PACSIN2-202	578	191aa	ENSDARP00000124620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000150099.2	PACSIN2-204	372	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: PACSIN2 ENSDARG00000078014

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Gene: PACSIN2 ENSDARG00000078014

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