Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: capn10 ENSDARG00000076634

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Description

calpain 10 [Source:ZFIN;Acc:ZDB-GENE-110411-137]

Gene Synonyms

si:ch73-216b13.1

Location

Chromosome 2: 45,139,470-45,154,622 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 3 transcripts (splice variants), 200 orthologues and 29 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109890.4	capn10-201	1977	658aa	ENSDARP00000097691.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QTM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000148595.3	capn10-202	2684	649aa	ENSDARP00000123910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9YJI5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150002.2	capn10-203	421	26aa	ENSDARP00000125074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5J4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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