Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sec61b ENSDARG00000076568

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Description

SEC61 translocon subunit beta [Source:ZFIN;Acc:ZDB-GENE-040718-260]

Location

Chromosome 16: 27,224,068-27,231,659 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 5 transcripts (splice variants) and 214 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059013.6	sec61b-201	968	97aa	ENSDARP00000059012.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136980.2	sec61b-202	510	75aa	ENSDARP00000124930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000146936.2	sec61b-204	466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000147416.2	sec61b-205	158	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137408.2	sec61b-203	862	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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