Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HDAC5 ENSDARG00000075139

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Description

histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]

Location

Chromosome 3: 22,905,341-22,976,456 forward strand.

GRCz11:CM002887.2

About this gene

This gene has 2 transcripts (splice variants), 197 orthologues, 11 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111435.4	HDAC5-202	3387	1128aa	ENSDARP00000100072.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FH14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157378.2	HDAC5-201	3583	1076aa	ENSDARP00000128586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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