Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SALL1 ENSDARG00000074319

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Description

spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]

Location

Chromosome 7: 37,359,004-37,392,172 forward strand.

GRCz11:CM002891.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111842.5	SALL1-202	6552	1313aa	ENSDARP00000102655.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QI36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173652.2	SALL1-201	6651	1217aa	ENSDARP00000142758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSE4	-
ENSDART00000192134.1	SALL1-203	4091	1217aa	ENSDARP00000145089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSE4	-
ENSDART00000189239.1	SALL1-204	3974	1217aa	ENSDARP00000157563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSE4	-

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Summary

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