Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lrrc39 ENSDARG00000071465

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Description

leucine rich repeat containing 39 [Source:ZFIN;Acc:ZDB-GENE-050417-279]

Location

Chromosome 22: 16,308,450-16,312,217 forward strand.

GRCz11:CM002906.2

About this gene

This gene has 2 transcripts (splice variants), 194 orthologues, 32 paralogues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105678.6	lrrc39-201	1506	343aa	ENSDARP00000096455.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PV96 F1R6I3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162685.2	lrrc39-202	1301	343aa	ENSDARP00000136641.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PV96 F1R6I3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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