Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOX2 ENSDARG00000070913

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Description

SRY-box transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]

Location

Chromosome 22: 37,347,896-37,349,967 reverse strand.

GRCz11:CM002906.2

About this gene

This gene has 1 transcript (splice variant), 149 orthologues, 27 paralogues and is associated with 31 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104493.5	SOX2-201	2072	315aa	ENSDARP00000095266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P0E1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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