Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pdlim2 ENSDARG00000069956

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Description

PDZ and LIM domain 2 (mystique) [Source:ZFIN;Acc:ZDB-GENE-070308-4]

Location

Chromosome 8: 38,190,233-38,317,914 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 2 transcripts (splice variants), 197 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125920.4	pdlim2-201	2727	364aa	ENSDARP00000109858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3AVD9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155189.2	pdlim2-202	713	142aa	ENSDARP00000127944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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