Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: adgrl2a ENSDARG00000069356

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Description

adhesion G protein-coupled receptor L2a [Source:ZFIN;Acc:ZDB-GENE-000607-49]

Gene Synonyms

id:ibd2808, lphn2, lphn2.1, lphn2a, wu:fb72a08

Location

Chromosome 11: 7,432,533-7,737,642 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 6 transcripts (splice variants), 200 orthologues, 112 paralogues and is associated with 14 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000193223.1	adgrl2a-205	6651	1483aa	ENSDARP00000156963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QN46	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000180977.1	adgrl2a-204	6823	1465aa	ENSDARP00000152452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QF57	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000171813.2	adgrl2a-203	6643	1231aa	ENSDARP00000142006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX48	-
ENSDART00000091550.6	adgrl2a-201	6618	1472aa	ENSDARP00000085983.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPV2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000193386.1	adgrl2a-206	6374	1416aa	ENSDARP00000153404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QK81	-
ENSDART00000165326.2	adgrl2a-202	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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