Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: tafa5a ENSDARG00000069160

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Description

TAFA chemokine like family member 5a [Source:ZFIN;Acc:ZDB-GENE-041210-344]

Gene Synonyms

fam19a5, fam19a5a, si:dkey-164m14.8, si:dkey-200m9.1, si:dkey-27f18.1

Location

Chromosome 4: 27,251,865-27,398,414 reverse strand.

GRCz11:CM002888.2

About this gene

This gene has 5 transcripts (splice variants), 159 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150553.2	tafa5a-204	399	132aa	ENSDARP00000125276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WEJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000100444.5	tafa5a-201	1736	111aa	ENSDARP00000091217.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QB79	-
ENSDART00000145806.3	tafa5a-203	962	131aa	ENSDARP00000114783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BIC8	-
ENSDART00000142117.4	tafa5a-202	659	124aa	ENSDARP00000125559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WFC7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000182746.1	tafa5a-205	418	133aa	ENSDARP00000152769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QIB8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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