Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:rp71-68n21.9 ENSDARG00000067751

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Description

si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]

Location

Chromosome 9: 21,165,017-21,176,861 forward strand.

GRCz11:CM002893.2

About this gene

This gene has 3 transcripts (splice variants), 78 orthologues and 69 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177286.2	si:rp71-68n21.9-203	3319	686aa	ENSDARP00000144154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145933.3	si:rp71-68n21.9-202	2212	686aa	ENSDARP00000118816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHV0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142985.2	si:rp71-68n21.9-201	338	79aa	ENSDARP00000112832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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