Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RNF220 ENSDARG00000060929

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Description

ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]

Location

Chromosome 2: 33,051,730-33,216,740 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 9 transcripts (splice variants), 259 orthologues, 1 paralogue and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086340.5	RNF220-203	1614	307aa	ENSDARP00000080775.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08CD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000187903.1	RNF220-209	5466	260aa	ENSDARP00000157220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000180008.1	RNF220-208	2707	216aa	ENSDARP00000154581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134651.3	RNF220-202	1734	577aa	ENSDARP00000116172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QFI1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000177902.2	RNF220-207	1339	223aa	ENSDARP00000144589.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136330.3	RNF220-206	762	197aa	ENSDARP00000121250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139295.3	RNF220-201	694	232aa	ENSDARP00000117678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000145588.3	RNF220-205	604	138aa	ENSDARP00000117326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143879.3	RNF220-204	855	70aa	ENSDARP00000120630.1	Nonsense mediated decay	-	-

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Summary

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