Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM8 ENSDARG00000060729

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Description

tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]

Gene Synonyms

si:ch211-208d15.5, trim8, wu:fc90g07

Location

Chromosome 12: 33,916,939-33,935,522 forward strand.

GRCz11:CM002896.2

About this gene

This gene has 2 transcripts (splice variants), 250 orthologues and 139 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085888.6	TRIM8-202	4037	564aa	ENSDARP00000080323.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZVP9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149292.3	TRIM8-201	329	56aa	ENSDARP00000124110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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