Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: usp16 ENSDARG00000060633

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Description

ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]

Location

Chromosome 15: 41,290,948-41,311,295 reverse strand.

GRCz11:CM002899.2

About this gene

This gene has 3 transcripts (splice variants), 210 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085645.6	usp16-201	3660	815aa	ENSDARP00000080080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QC36 A8HAL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133835.2	usp16-202	746	107aa	ENSDARP00000123938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134075.2	usp16-203	488	113aa	ENSDARP00000120379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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