Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS8 ENSDARG00000060477

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Description

VPS8 subunit of CORVET complex [Source:ZFIN;Acc:ZDB-GENE-060503-348]

Location

Chromosome 1: 30,083,578-30,310,689 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 4 transcripts (splice variants), 223 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143639.3	VPS8-203	4399	1412aa	ENSDARP00000117166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000101779.6	VPS8-204	1528	455aa	ENSDARP00000092555.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000146783.2	VPS8-202	830	235aa	ENSDARP00000113658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134311.3	VPS8-201	687	146aa	ENSDARP00000120853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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