Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: susd1 ENSDARG00000058839

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Description

sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]

Gene Synonyms

si:ch211-29n12.1, si:ch73-247j11.2

Location

Chromosome 5: 9,246,018-9,278,521 forward strand.

GRCz11:CM002889.2

About this gene

This gene has 5 transcripts (splice variants) and 193 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081772.5	susd1-202	3483	921aa	ENSDARP00000076211.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183189.1	susd1-204	2961	561aa	ENSDARP00000146487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q1R9	-
ENSDART00000081769.5	susd1-201	2662	575aa	ENSDARP00000076208.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRX3	-
ENSDART00000185560.1	susd1-205	2194	490aa	ENSDARP00000144652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RHE1	-
ENSDART00000163060.2	susd1-203	853	284aa	ENSDARP00000141004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJK9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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