Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP1 ENSDARG00000056414

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Description

ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]

Location

Chromosome 6: 32,394,502-32,411,727 reverse strand.

GRCz11:CM002890.2

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues, 41 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000078908.7	USP1-201	3347	772aa	ENSDARP00000073367.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151002.2	USP1-202	541	134aa	ENSDARP00000126161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133162.3	USP1-203	718	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

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Summary

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